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  Home > Genomes > Escherichia coli K-12 subMG1655 > gi|16129885|ref|NP_416448.1|

Domain assignment for gi|16129885|ref|NP_416448.1| from Escherichia coli K-12 subMG1655

Domain architecture

Domain assignment details

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No Significant Hits.

Protein sequence

External link(s) gi|16129885|ref|NP_416448.1|
Sequence length 552
Comment flagellar basal-body MS-ring and collar protein [Escherichia coli str. K-12 substr. MG1655]
Sequence 
MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDG
GAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGI
SQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPG
RALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEG
RIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQ
SGSGYPGGVPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRSTQRNETSNYEV
DRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGKPLPLSNEQMKQIEDLTREAMGFSEKRGD
SLNVVNSPFNSSDESGGELPFWQQQAFIDQLLAAGRWLLVLLVAWLLWRKAVRPQLTRRA
EAMKAVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVA
LVIRQWINNDHE
Download sequence
Identical sequences A8A1E0 B1LQS0 B1X692 B3IR10 B7M378 P25798
gi|260855913|ref|YP_003229804.1| gi|238901143|ref|YP_002926939.1| gi|170682432|ref|YP_001743307.1| gi|170081582|ref|YP_001730902.1| gi|253773113|ref|YP_003035944.1| gi|89108770|ref|AP_002550.1| gi|157161409|ref|YP_001458727.1| gi|218554518|ref|YP_002387431.1|

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2001-2010 The Medical Research Council and the SUPERFAMILY authors; Derek Wilson, Martin Madera and Julian Gough.